Image Analysis Workstations

Image analysis workstations at LMU.
AI Workstation

AI Workstation is well suited for image Analysis which benefits for multiple processors, lots of central memory and modern CUDA capable graphics cards.

Software

Imaris Suite
InCarta for data from MD Micro
CellPose
MicroSAM (Segment Anything for Microscopy)
QPath
Fiji x64 with CUDA capability
Matlab

Microscope Image Browser MIB, (Matlab version)

 

 

Room 2036c
4D Work­sta­tion

4D workstation is a powerful workstation for 3D image analysis and processing for large data sets. This workstation has an Imaris software package. ImarisXT module allows you to use Matlab and Python scripts and Fiji modules within Imaris.  Huygens Professional for deconvolution and image fusions.

Soft­ware

Bitplane Imaris suite with Batch coordinator
Huygens Professional
Fiji 64x
Matlab 64x

Room 2036c
HELMI 3D VM

HELMI 3D VM is a virtual machine which is used from your own workstation by Omnissa Horizon Client. are in LMU wiki. At the moment major software for the virtual machine are full Imaris installation and Fiji.  Workstation has CUDA capability so FIji plugins that are made for CUDA computing works there. Capabilities is generally less than other workstations so this is a good tool if you don't have a very big data set. 

 
Linux work­sta­tions

Our old workstations are recycled to continue service with Linux operating system.

LS workstation has CUDA capable graphic card with 8 GB memory and 256GB Central memory.  

3D workstation will soon follow...

 

 

Under Installation

 

Soft­ware

 

Room 2036c