22. Hiekkalinna T, Göring HHH and Terwilliger JD. On the Validity of the Likelihood Ratio Test and Consistency of Resulting Parameter Estimates in Joint Linkage and Linkage Disequilibrium Analysis under Improperly Specified Parametric Models. Annals of Human Genetics 2011. doi: 10.1111/j.1469-1809.2011.00683.x
21. Maija Wessman, Carol Forsblom, Mari A. Kaunisto, Jenny Söderlund, Jorma Ilonen, Riitta Sallinen, Tero Hiekkalinna, Maija Parkkonen, Alexander P. Maxwell, Lise Tarnow, Hans-Henrik Parving, Samy Hadjadj, Michel Marre, Leena Peltonen, Per-Henrik Groop, on behalf of the FinnDiane Study Group. PLoS One. 2011;6(9):e24053. Epub 2011 Sep 1.
20. Hiekkalinna T, Göring HHH, Lambert BW, Weiss KM, Norrgrann P, Schäffer AA, Terwilliger JD: On the statistical properties of family-based association tests in datasets containing both pedigrees and unrelated case-control samples. European Journal of Human Genetics advance online publication 21 September 2011; doi: 10.1038/ejhg.2011.173.
19. T. Hiekkalinna, A. A. Schäffer, B. W. Lambert, P. Norrgrann, H.H.H. Göring, J.D. Terwilliger. PSEUDOMARKER: A Powerful Program for Joint Linkage and/or Linkage Disequilibrium Analysis on Mixtures of Singletons and Related Individuals. Human Heredity 2011;71:256-266
18. Tiina Paunio, Ritva Arajärvi, Joseph D. Terwilliger, Tero Hiekkalinna, Perttu Haimi, Timo Partonen, Jouko Lönnqvist, Leena Peltonen, Teppo Varilo. Linkage analysis of schizophrenia controlling for population substructure. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics (2009).
17. Sampo Sammalisto, Tero Hiekkalinna, Karen Schwander, Sharon Kardia, Alan B Weder, Beatriz L Rodriguez6, Alessandro Doria, Jennifer A Kelly, Gail R Bruner, John B Harley, Susan Redline, Emma K Larkin, Sanjay R Patel, Amy JH Ewan, James L Weber, Markus Perola, and Leena Peltonen. Genome-wide linkage screen for stature and body mass index in 3.032 families: evidence for sex- and population-specific genetic effects. European Journal of Human Genetics (2008).
16. Markus Perola, Sampo Sammalisto, Tero Hiekkalinna, Nick G. Martin, Peter M. Visscher, Grant W. Montgomery, Beben Benyamin, Jennifer R. Harris, Dorret Boomsma, Gonneke Willemsen, Jouke-Jan Hottenga, Kaare Christensen, Kirsten Ohm Kyvik, Thorkild I. A. Sørensen, Nancy L. Pedersen, Patrik K. E. Magnusson, Tim D. Spector, Elisabeth Widen, Karri Silventoinen, Jaakko Kaprio, Aarno Palotie, Leena Peltonen, GenomEUtwin Project. Combined Genome Scans for Body Stature in 6,602 European Twins: Evidence for Common Caucasian Loci. PLoS Genetics Vol. 3, No. 6, e97 doi:10.1371/journal.pgen.0030097. (link)
15. Antti Knaapila, Kaisu Keskitalo, Mikko Kallela, Maija Wessman, Sampo Sammalisto, Tero Hiekkalinna, Aarno Palotie, Leena Peltonen, Hely Tuorila and Markus Perola ,Genetic component of identification, intensity and pleasantness of odours: a Finnish family study. European Journal of Human Genetics (2007), 1–7. (link)
14. William Hennah, Liisa Tomppo, Tero Hiekkalinna, Outi M Palo, Helena Kilpinen, Jesper Ekelund, Annamari Tuulio-Henriksson, Kaisa Silander, Timo Partonen, Tiina Paunio, Joseph D Terwilliger, Jouko Lönnqvist, Leena Peltonen. Families with the Risk Allele of DISC1 Reveal a Link Between Schizophrenia and Another Component of the Same Molecular Pathway, NDE1. Hum Mol Genet. 2006 Dec 21
13. Terwilliger JD, Hiekkalinna T. An utter refutation of the "Fundamental Theorem of the HapMap". Eur J Hum Genet. 2006 Apr;14(4):426-37 (link)
12. Tero Hiekkalinna, Joseph D Terwilliger, Sampo Sammalisto, Leena Peltonen, Markus Perola. AUTOGSCAN: Powerful Tools for Automated Genome-wide Linkage and Linkage Disequilibrium Analysis. Twin Research and Human Genetics, 2005 Feb, Vol 8, No 1 pp. 16-21.
11. Sammalisto S, Hiekkalinna T, Suviolahti E, Sood K, Metzidis A, Pajukanta P, Lilja HE, Soro-Paavonen A, Taskinen MR, Tuomi T, Almgren P, Orho-Melander M, Groop L, Peltonen L, Perola M.. A male-specific quantitative trait locus on 1p21 controlling human stature. Journal of Medical Genetics 2005; 42: 932-939
10. Heidi E. Lilja, Elina Suviolahti, Aino Soro-Paavonen, Tero Hiekkalinna, Aaron Day, Kenneth Lange, Eric Sobel, Marja-Riitta Taskinen, Leena Peltonen, Markus Perola, and Päivi Pajukanta. Locus for quantitative HDL-cholesterol on chromosome 10q in Finnish families with dyslipidemia. Journal of Lipid Research, Jul 2004; 10.1194/jlr.M400141-JLR200.
9. Tiina Paunio, Annamari Tuulio-Henriksson, Tero Hiekkalinna, Markus Perola, Teppo Varilo, Timo Partonen, Tyrone D. Cannon, Jouko Lönnqvist and Leena Peltonen. Search for cognitive trait components of schizophrenia reveals a locus for verbal learning and memory on 4q and for visual working memory on 2q. Human Molecular Genetics, 2004, Vol. 13, No. 16 1693-1702
8. J Ekelund, W Hennah, T Hiekkalinna, A Parker, J Meyer, J Lönnqvist and L Peltonen. Replication of 1q42 linkage in Finnish schizophrenia pedigrees. Molecular Psychiatry (2004) 9, 1037-1041.
7. Ekholm JM, Kieseppa T, Hiekkalinna T, Partonen T, Paunio T, Perola M, Ekelund J, Lonnqvist J, Pekkarinen-Ijas P, Peltonen L. Evidence of susceptibility loci on 4q32 and 16p12 for bipolar disorder. Human Molecular Genetics. 2003 Aug 1;12(15):1907-1915.
6. Joseph D. Terwilliger, Fatemeh Haghighi, Tero S. Hiekkalinna and Harald H.H. Göring. A bias-ed assessment of the use of SNPs in human complex traits [Review]. Current Opinion in Genetics and Development, 2002, 12:6:726-734
5. Soro A, Pajukanta P, Lilja HE, Ylitalo K, Hiekkalinna T, Perola M, Cantor RM, Viikari JSA, Taskinen M-R, Peltonen L. Genome scans provide evidence for low hdl-c loci on 8q23, 16q24.1-24.2 and 20q13.11 in Finnish families. American Journal of Human Genetics.2002 May;70(5):1333-40
4. Wessman M, Kallela M, Kaunisto MA, Marttila P, Sobel E, Hartiala J, Oswell G, Leal SM, Papp JC, Hamalainen E, Broas P, Joslyn G, Hovatta I, Hiekkalinna T, Kaprio J, Ott J, Cantor RM, Zwart JA, Ilmavirta M, Havanka H, Farkkila M, Peltonen L, Palotie A. A susceptibility locus for migraine with aura, on chromosome 4q24. Am J Hum Genet. 2002 Mar;70(3):652-62.
3. Perola M, Öhman M, Hiekkalinna T, Leppävuori J, Pajukanta P, Wessman M, Koskenvuo M, Palotie A, Lange K, Kaprio J, Peltonen L. QTL analysis of body mass index and stature by combined analysis of five Finnish study groups. American Journal of Human Genetics. 2001 Jul;69(1):117-23.
2. Perola M, Kainulainen K, Pajukanta P, Hiekkalinna T, Ellonen P, Kaprio J, Koskenvuo M, Kontula K, Peltonen L. Genome-wide scan in Finnish siblings with elevated diastolic blood pressure. Journal of Hypertension 2000 Nov;18(11):1579-85
1. Pajukanta P, Terwilliger JD, Perola M, Hiekkalinna T, Nuotio I, Ellonen P, Parkkonen M, Hartiala J, Ylitalo K, Pihlajamaki J, Porkka K, Laakso M, Viikari J, Ehnholm C, Taskinen MR, Peltonen L. Genomewide scan for familial combined hyperlipidemia genes in finnish families, suggesting multiple susceptibility loci influencing triglyceride, cholesterol, and apolipoprotein B levels. American Journal of Human Genetics. 1999 May;64(5):1453-63
Hiekkalinna T, Peltonen L. New program: AUTOSCAN 1.0 automated use of linkage analysis programs. American Journal of Human Genetics, VOL. 65 NO. 4 Supp, (1999).
Hiekkalinna T, Göring HHH, Peltonen L and Terwilliger JD. PSEUDOMARKER: Computer software for linkage and linkage disequilibrium analysis of complex traits. American Journal of Human Genetics, VOL. 67 NO. 4 Supp 2, (2000).
Hiekkalinna T, Peltonen L and Terwilliger JD. MULTIDISEQ: Computer software for multipoint linkage analysis of complex traits allowing for marker-marker LD (Linkage Disequilibrium). American Journal of Human Genetics, VOL 73, NO. 5, Supp, (2003).
Hiekkalinna T, Perola M, Terwilliger JD. Linkage analysis genome scans with tens of thousands of SNPs gives systematically higher power than traditional microsatellite-based approaches under the NULL hypothesis. Twin Research. VOL 7 NO. 6 Dec 2004.
Hiekkalinna T, Terwilliger JD. Powerful, conservative and robust family-based association test: PSEUDOMARKER. HUGO's 11th Human Genome Meeting (HGM2006).