[University of Helsinki Department of Mathematics Biomathematics and Biometry ]

APE (Allelic Path Explorer)

APE is a program for extending partially known genotype data on a given pedigree consistently (i.e. in accordance with the Mendelian rules) to the whole pedigree.

Reference:

Pirinen M. and Gasbarra D. (2006)
Finding Consistent Gene Transmission Patterns on Large and Complex Pedigrees
IEEE/ACM Transactions on Computational Biology and Bioinformatics vol.3:3:252-262 (PDF)

The use of the source code is allowed under the terms of the GNU general public license (version 2).

APE.tar (Version 1.0. 06-Dec-2005)

APE was written in ANSI-C and tested under Linux with the GNU C-compiler gcc 2.95.4.

Contact: matti.pirinen('at')helsinki.fi

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